/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K010399_1798641_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 6419612 | 100.00 % | 3209806 | 100.00 % | 3209806 | 100.00 % |
| General Reads | 4808100 | 74.90 % | 2455736 | 76.51 % | 2352364 | 73.29 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 56 | 0.00 % | 28 | 0.00 % | 28 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 1611456 | 25.10 % | 754042 | 23.49 % | 857414 | 26.71 % |
| Bisulfite_reads C2T | 2475620 | 38.56 % | 1264001 | 39.38 % | 1211619 | 37.75 % |
| Bisulfite_reads G2A | 2332536 | 36.33 % | 1191763 | 37.13 % | 1140773 | 35.54 % |
| Concept | Value |
|---|---|
| Unique Fragments | 1766066 |
| Average Unique | 55.02 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 160667903 | 32.93 % | 66634241 | 27.32 % | 94033662 | 38.55 % |
| Base Counts Overall C | 78753750 | 16.14 % | 22048124 | 9.04 % | 56705626 | 23.25 % |
| Base Counts Overall G | 86274733 | 17.68 % | 59991347 | 24.59 % | 26283386 | 10.77 % |
| Base Counts Overall T | 155493212 | 31.87 % | 92050154 | 37.73 % | 63443058 | 26.01 % |
| Base Counts Overall N | 6700914 | 1.37 % | 3221390 | 1.32 % | 3479524 | 1.43 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 2242659 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 3209806 |
| 75 | 3209806 |
| Insert Size Histogram |
|---|
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