/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K010400_1798642_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 40803260 | 100.00 % | 20401630 | 100.00 % | 20401630 | 100.00 % |
| General Reads | 36933814 | 90.52 % | 18726731 | 91.79 % | 18207083 | 89.24 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 95 | 0.00 % | 48 | 0.00 % | 47 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3869351 | 9.48 % | 1674851 | 8.21 % | 2194500 | 10.76 % |
| Bisulfite_reads C2T | 19044410 | 46.67 % | 9652915 | 47.31 % | 9391495 | 46.03 % |
| Bisulfite_reads G2A | 17889499 | 43.84 % | 9073864 | 44.48 % | 8815635 | 43.21 % |
| Concept | Value |
|---|---|
| Unique Fragments | 13266833 |
| Average Unique | 65.03 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1125812925 | 36.30 % | 448586928 | 28.93 % | 677225997 | 43.68 % |
| Base Counts Overall C | 415281916 | 13.39 % | 54499370 | 3.51 % | 360782546 | 23.27 % |
| Base Counts Overall G | 453506385 | 14.62 % | 378016972 | 24.38 % | 75489413 | 4.87 % |
| Base Counts Overall T | 1063603397 | 34.30 % | 648948403 | 41.85 % | 414654994 | 26.74 % |
| Base Counts Overall N | 42843137 | 1.38 % | 20472207 | 1.32 % | 22370930 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 17124076 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 20401630 |
| 75 | 20401630 |
| Insert Size Histogram |
|---|
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