/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K010401_1798643_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 54170406 | 100.00 % | 27085203 | 100.00 % | 27085203 | 100.00 % |
| General Reads | 48507839 | 89.55 % | 24629947 | 90.94 % | 23877892 | 88.16 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 167 | 0.00 % | 85 | 0.00 % | 82 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5662400 | 10.45 % | 2455171 | 9.06 % | 3207229 | 11.84 % |
| Bisulfite_reads C2T | 25026824 | 46.20 % | 12702693 | 46.90 % | 12324131 | 45.50 % |
| Bisulfite_reads G2A | 23481182 | 43.35 % | 11927339 | 44.04 % | 11553843 | 42.66 % |
| Concept | Value |
|---|---|
| Unique Fragments | 18313642 |
| Average Unique | 67.61 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1450227294 | 35.23 % | 573750617 | 27.87 % | 876476677 | 42.58 % |
| Base Counts Overall C | 561790876 | 13.65 % | 78060973 | 3.79 % | 483729903 | 23.50 % |
| Base Counts Overall G | 606163294 | 14.72 % | 498883766 | 24.24 % | 107279528 | 5.21 % |
| Base Counts Overall T | 1442152577 | 35.03 % | 880594855 | 42.78 % | 561557722 | 27.28 % |
| Base Counts Overall N | 56616815 | 1.38 % | 27185217 | 1.32 % | 29431598 | 1.43 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | -0.005213153496827785 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 22860731 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 27085203 |
| 75 | 27085203 |
| Insert Size Histogram |
|---|
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