/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K011779_1894721_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 29087376 | 100.00 % | 14543688 | 100.00 % | 14543688 | 100.00 % |
| General Reads | 16848069 | 57.92 % | 8504907 | 58.48 % | 8343162 | 57.37 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 78 | 0.00 % | 41 | 0.00 % | 37 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 12239229 | 42.08 % | 6038740 | 41.52 % | 6200489 | 42.63 % |
| Bisulfite_reads C2T | 8664415 | 29.79 % | 4372599 | 30.07 % | 4291816 | 29.51 % |
| Bisulfite_reads G2A | 8183732 | 28.13 % | 4132349 | 28.41 % | 4051383 | 27.86 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6680690 |
| Average Unique | 45.94 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 589671542 | 26.33 % | 297681879 | 26.58 % | 291989663 | 26.07 % |
| Base Counts Overall C | 510411701 | 22.79 % | 262768086 | 23.46 % | 247643615 | 22.11 % |
| Base Counts Overall G | 512481200 | 22.88 % | 251609887 | 22.47 % | 260871313 | 23.29 % |
| Base Counts Overall T | 597553806 | 26.68 % | 293063657 | 26.17 % | 304490149 | 27.19 % |
| Base Counts Overall N | 29609703 | 1.32 % | 14740467 | 1.32 % | 14869236 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 8154384 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14543688 |
| 76 | 14543688 |
| Insert Size Histogram |
|---|
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