/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K011783_1894725_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 25280612 | 100.00 % | 12640306 | 100.00 % | 12640306 | 100.00 % |
| General Reads | 8860377 | 35.05 % | 4452219 | 35.22 % | 4408158 | 34.87 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 35 | 0.00 % | 13 | 0.00 % | 22 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 16420200 | 64.95 % | 8188074 | 64.78 % | 8232126 | 65.13 % |
| Bisulfite_reads C2T | 4551617 | 18.00 % | 2289159 | 18.11 % | 2262458 | 17.90 % |
| Bisulfite_reads G2A | 4308795 | 17.04 % | 2163073 | 17.11 % | 2145722 | 16.98 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3473951 |
| Average Unique | 27.48 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 553140020 | 28.42 % | 260635886 | 26.78 % | 292504134 | 30.05 % |
| Base Counts Overall C | 404563878 | 20.78 % | 186741685 | 19.19 % | 217822193 | 22.38 % |
| Base Counts Overall G | 408006447 | 20.96 % | 220474875 | 22.65 % | 187531572 | 19.27 % |
| Base Counts Overall T | 555167671 | 28.52 % | 292640206 | 30.07 % | 262527465 | 26.97 % |
| Base Counts Overall N | 25729108 | 1.32 % | 12810910 | 1.32 % | 12918198 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4249017 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12640306 |
| 76 | 12640306 |
| Insert Size Histogram |
|---|
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