/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K011785_1894727_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 21656592 | 100.00 % | 10828296 | 100.00 % | 10828296 | 100.00 % |
| General Reads | 11613261 | 53.62 % | 5862795 | 54.14 % | 5750466 | 53.11 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 106 | 0.00 % | 53 | 0.00 % | 53 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10043225 | 46.37 % | 4965448 | 45.86 % | 5077777 | 46.89 % |
| Bisulfite_reads C2T | 5971420 | 27.57 % | 3013613 | 27.83 % | 2957807 | 27.32 % |
| Bisulfite_reads G2A | 5641947 | 26.05 % | 2849235 | 26.31 % | 2792712 | 25.79 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4591849 |
| Average Unique | 42.41 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 438613059 | 26.30 % | 220771906 | 26.48 % | 217841153 | 26.13 % |
| Base Counts Overall C | 380238817 | 22.80 % | 195957589 | 23.50 % | 184281228 | 22.10 % |
| Base Counts Overall G | 382539553 | 22.94 % | 187452909 | 22.48 % | 195086644 | 23.40 % |
| Base Counts Overall T | 444123881 | 26.63 % | 218622426 | 26.22 % | 225501455 | 27.05 % |
| Base Counts Overall N | 22042274 | 1.32 % | 10973962 | 1.32 % | 11068312 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5611375 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 10828296 |
| 76 | 10828296 |
| Insert Size Histogram |
|---|
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