/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K011786_1894728_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 28290886 | 100.00 % | 14145443 | 100.00 % | 14145443 | 100.00 % |
| General Reads | 6152250 | 21.75 % | 3100403 | 21.92 % | 3051847 | 21.57 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 33 | 0.00 % | 17 | 0.00 % | 16 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 22138603 | 78.25 % | 11045023 | 78.08 % | 11093580 | 78.43 % |
| Bisulfite_reads C2T | 3167123 | 11.19 % | 1595679 | 11.28 % | 1571444 | 11.11 % |
| Bisulfite_reads G2A | 2985160 | 10.55 % | 1504741 | 10.64 % | 1480419 | 10.47 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2272330 |
| Average Unique | 16.06 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 573932987 | 26.35 % | 290589027 | 26.68 % | 283343960 | 26.01 % |
| Base Counts Overall C | 496675264 | 22.80 % | 254484546 | 23.36 % | 242190718 | 22.24 % |
| Base Counts Overall G | 502121610 | 23.05 % | 245033387 | 22.50 % | 257088223 | 23.60 % |
| Base Counts Overall T | 576866052 | 26.48 % | 284754700 | 26.14 % | 292111352 | 26.82 % |
| Base Counts Overall N | 28802309 | 1.32 % | 14337451 | 1.32 % | 14464858 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 2867538 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14145443 |
| 76 | 14145443 |
| Insert Size Histogram |
|---|
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