/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K011789_1894731_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 14615674 | 100.00 % | 7307837 | 100.00 % | 7307837 | 100.00 % |
| General Reads | 6144209 | 42.04 % | 3092977 | 42.32 % | 3051232 | 41.75 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 39 | 0.00 % | 19 | 0.00 % | 20 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8471426 | 57.96 % | 4214841 | 57.68 % | 4256585 | 58.25 % |
| Bisulfite_reads C2T | 3163693 | 21.65 % | 1591906 | 21.78 % | 1571787 | 21.51 % |
| Bisulfite_reads G2A | 2980555 | 20.39 % | 1501090 | 20.54 % | 1479465 | 20.24 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2435006 |
| Average Unique | 33.32 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 289135078 | 25.69 % | 145578635 | 25.87 % | 143556443 | 25.51 % |
| Base Counts Overall C | 263401134 | 23.40 % | 135869661 | 24.15 % | 127531473 | 22.66 % |
| Base Counts Overall G | 265931655 | 23.63 % | 129565660 | 23.03 % | 136365995 | 24.23 % |
| Base Counts Overall T | 292055378 | 25.95 % | 144281436 | 25.64 % | 147773942 | 26.26 % |
| Base Counts Overall N | 14883653 | 1.32 % | 7408057 | 1.32 % | 7475596 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 2976562 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 7307837 |
| 76 | 7307837 |
| Insert Size Histogram |
|---|
 |