/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K011790_1894732_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 30511192 | 100.00 % | 15255596 | 100.00 % | 15255596 | 100.00 % |
| General Reads | 21845439 | 71.60 % | 10982824 | 71.99 % | 10862615 | 71.20 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 26 | 0.00 % | 13 | 0.00 % | 13 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8665727 | 28.40 % | 4272759 | 28.01 % | 4392968 | 28.80 % |
| Bisulfite_reads C2T | 11220102 | 36.77 % | 5639605 | 36.97 % | 5580497 | 36.58 % |
| Bisulfite_reads G2A | 10625363 | 34.82 % | 5343232 | 35.02 % | 5282131 | 34.62 % |
| Concept | Value |
|---|---|
| Unique Fragments | 8998215 |
| Average Unique | 58.98 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 636599331 | 27.10 % | 321475219 | 27.37 % | 315124112 | 26.83 % |
| Base Counts Overall C | 517399121 | 22.02 % | 269533808 | 22.95 % | 247865313 | 21.10 % |
| Base Counts Overall G | 517271547 | 22.02 % | 250012137 | 21.28 % | 267259410 | 22.75 % |
| Base Counts Overall T | 647022722 | 27.54 % | 318196169 | 27.09 % | 328826553 | 27.99 % |
| Base Counts Overall N | 31069063 | 1.32 % | 15463559 | 1.32 % | 15605504 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 10552971 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 15255596 |
| 76 | 15255596 |
| Insert Size Histogram |
|---|
 |