/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K011792_1894734_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 24189856 | 100.00 % | 12094928 | 100.00 % | 12094928 | 100.00 % |
| General Reads | 10222803 | 42.26 % | 5156928 | 42.64 % | 5065875 | 41.88 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 18 | 0.00 % | 11 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 13967035 | 57.74 % | 6937989 | 57.36 % | 7029046 | 58.12 % |
| Bisulfite_reads C2T | 5251441 | 21.71 % | 2648280 | 21.90 % | 2603161 | 21.52 % |
| Bisulfite_reads G2A | 4971380 | 20.55 % | 2508659 | 20.74 % | 2462721 | 20.36 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4033142 |
| Average Unique | 33.35 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 485572339 | 26.07 % | 243004084 | 26.09 % | 242568255 | 26.05 % |
| Base Counts Overall C | 428500778 | 23.01 % | 217001044 | 23.30 % | 211499734 | 22.71 % |
| Base Counts Overall G | 433650052 | 23.28 % | 214931873 | 23.08 % | 218718179 | 23.49 % |
| Base Counts Overall T | 490265681 | 26.32 % | 244111453 | 26.21 % | 246154228 | 26.43 % |
| Base Counts Overall N | 24630062 | 1.32 % | 12261002 | 1.32 % | 12369060 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4936462 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12094928 |
| 76 | 12094928 |
| Insert Size Histogram |
|---|
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