/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K011793_1894735_2

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SAMPLE K010391_K011797_30libs_30_lane_gembs LANE EXTERNAL-K011793_1894735_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 25665770 100.00 % 12832885 100.00 % 12832885 100.00 %
General Reads 17164431 66.88 % 8666583 67.53 % 8497848 66.22 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 159 0.00 % 81 0.00 % 78 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8501180 33.12 % 4166221 32.47 % 4334959 33.78 %
Bisulfite_reads C2T 8825334 34.39 % 4454364 34.71 % 4370970 34.06 %
Bisulfite_reads G2A 8339256 32.49 % 4212300 32.82 % 4126956 32.16 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 6805532
Average Unique 53.03 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 538123378 27.23 % 276233687 27.96 % 261889691 26.50 %
Base Counts Overall C 430990621 21.81 % 218586337 22.12 % 212404284 21.50 %
Base Counts Overall G 434314659 21.98 % 215941372 21.85 % 218373287 22.10 %
Base Counts Overall T 546711019 27.66 % 264365520 26.75 % 282345499 28.57 %
Base Counts Overall N 26124613 1.32 % 13005229 1.32 % 13119384 1.33 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate -0.02461470498070989
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 8323079



Mapping Quality

Mapping Quality Histogram
EXTERNAL-K011793_1894735_2.mapq.png



Read Length

Read Length Reads
76 12832885
76 12832885



Insert Size Plot

Insert Size Histogram
EXTERNAL-K011793_1894735_2.isize.png