/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K011794_1894736_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 28553208 | 100.00 % | 14276604 | 100.00 % | 14276604 | 100.00 % |
| General Reads | 11093901 | 38.85 % | 5583481 | 39.11 % | 5510420 | 38.60 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 22 | 0.00 % | 14 | 0.00 % | 8 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 17459285 | 61.15 % | 8693109 | 60.89 % | 8766176 | 61.40 % |
| Bisulfite_reads C2T | 5709059 | 19.99 % | 2872524 | 20.12 % | 2836535 | 19.87 % |
| Bisulfite_reads G2A | 5384864 | 18.86 % | 2710971 | 18.99 % | 2673893 | 18.73 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4377452 |
| Average Unique | 30.66 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 577911157 | 26.29 % | 289609107 | 26.34 % | 288302050 | 26.23 % |
| Base Counts Overall C | 500542520 | 22.77 % | 252328240 | 22.95 % | 248214280 | 22.58 % |
| Base Counts Overall G | 508668821 | 23.14 % | 252584201 | 22.98 % | 256084620 | 23.30 % |
| Base Counts Overall T | 582387251 | 26.49 % | 290300451 | 26.41 % | 292086800 | 26.57 % |
| Base Counts Overall N | 29087267 | 1.32 % | 14476509 | 1.32 % | 14610758 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5352941 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14276604 |
| 76 | 14276604 |
| Insert Size Histogram |
|---|
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