/EXTERNAL BLUEPRINT/K010391_K011797_30libs_30_lane_gembs/EXTERNAL-K011797_1894739_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 23604430 | 100.00 % | 11802215 | 100.00 % | 11802215 | 100.00 % |
| General Reads | 9563995 | 40.52 % | 4818166 | 40.82 % | 4745829 | 40.21 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 60 | 0.00 % | 34 | 0.00 % | 26 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 14040375 | 59.48 % | 6984015 | 59.18 % | 7056360 | 59.79 % |
| Bisulfite_reads C2T | 4912166 | 20.81 % | 2473907 | 20.96 % | 2438259 | 20.66 % |
| Bisulfite_reads G2A | 4651889 | 19.71 % | 2344293 | 19.86 % | 2307596 | 19.55 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3783554 |
| Average Unique | 32.06 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 456948455 | 25.14 % | 229930935 | 25.30 % | 227017520 | 24.98 % |
| Base Counts Overall C | 434240365 | 23.89 % | 218977161 | 24.10 % | 215263204 | 23.69 % |
| Base Counts Overall G | 440520172 | 24.24 % | 218996692 | 24.10 % | 221523480 | 24.38 % |
| Base Counts Overall T | 461804530 | 25.41 % | 228903486 | 25.19 % | 232901044 | 25.63 % |
| Base Counts Overall N | 24027588 | 1.32 % | 11962281 | 1.32 % | 12065307 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4630825 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11802215 |
| 76 | 11802215 |
| Insert Size Histogram |
|---|
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