/EXTERNAL BLUEPRINT/K011770_K011771_K011772_K011773_K011774_K011775_K011776_K011777_K011778_K011798_K011799_11_lane_gembs/EXTERNAL-K011772_1894714_2
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SAMPLE K011770_K011771_K011772_K011773_K011774_K011775_K011776_K011777_K011778_K011798_K011799_11_lane_gembs LANE EXTERNAL-K011772_1894714_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 15883340 | 100.00 % | 7941670 | 100.00 % | 7941670 | 100.00 % |
| General Reads | 10630651 | 66.93 % | 5351830 | 67.39 % | 5278821 | 66.47 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10 | 0.00 % | 5 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5252679 | 33.07 % | 2589835 | 32.61 % | 2662844 | 33.53 % |
| Bisulfite_reads C2T | 5472213 | 34.45 % | 2753818 | 34.68 % | 2718395 | 34.23 % |
| Bisulfite_reads G2A | 5158448 | 32.48 % | 2598017 | 32.71 % | 2560431 | 32.24 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 4165825 |
| Average Unique | 52.46 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 366577769 | 29.97 % | 164276171 | 26.86 % | 202301598 | 33.08 % |
| Base Counts Overall C | 233042583 | 19.05 % | 85065333 | 13.91 % | 147977250 | 24.20 % |
| Base Counts Overall G | 240418017 | 19.66 % | 151410901 | 24.76 % | 89007116 | 14.56 % |
| Base Counts Overall T | 367020407 | 30.01 % | 202778948 | 33.16 % | 164241459 | 26.86 % |
| Base Counts Overall N | 15958404 | 1.30 % | 7977237 | 1.30 % | 7981167 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 5123655 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 7941670 |
| 76 | 7941670 |
Insert Size Plot
| Insert Size Histogram |
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