/EXTERNAL BLUEPRINT/K011770_K011771_K011772_K011773_K011774_K011775_K011776_K011777_K011778_K011798_K011799_11_lane_gembs/EXTERNAL-K011775_1894717_2
BACK
SAMPLE K011770_K011771_K011772_K011773_K011774_K011775_K011776_K011777_K011778_K011798_K011799_11_lane_gembs LANE EXTERNAL-K011775_1894717_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 13653950 | 100.00 % | 6826975 | 100.00 % | 6826975 | 100.00 % |
| General Reads | 8648908 | 63.34 % | 4355381 | 63.80 % | 4293527 | 62.89 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 14 | 0.00 % | 5 | 0.00 % | 9 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5005028 | 36.66 % | 2471589 | 36.20 % | 2533439 | 37.11 % |
| Bisulfite_reads C2T | 4462194 | 32.68 % | 2246398 | 32.90 % | 2215796 | 32.46 % |
| Bisulfite_reads G2A | 4186728 | 30.66 % | 2108988 | 30.89 % | 2077740 | 30.43 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 3337277 |
| Average Unique | 48.88 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 314401952 | 29.90 % | 136924162 | 26.05 % | 177477790 | 33.76 % |
| Base Counts Overall C | 202064806 | 19.22 % | 72025073 | 13.70 % | 130039733 | 24.74 % |
| Base Counts Overall G | 208204471 | 19.80 % | 133123939 | 25.32 % | 75080532 | 14.28 % |
| Base Counts Overall T | 312961945 | 29.77 % | 176747022 | 33.62 % | 136214923 | 25.91 % |
| Base Counts Overall N | 13720976 | 1.31 % | 6856879 | 1.30 % | 6864097 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 4132013 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 6826975 |
| 76 | 6826975 |
Insert Size Plot
| Insert Size Histogram |
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