/EXTERNAL BLUEPRINT/K011770_K011771_K011772_K011773_K011774_K011775_K011776_K011777_K011778_K011798_K011799_11_lane_gembs/EXTERNAL-K011798_1894740_2
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SAMPLE K011770_K011771_K011772_K011773_K011774_K011775_K011776_K011777_K011778_K011798_K011799_11_lane_gembs LANE EXTERNAL-K011798_1894740_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 41047730 | 100.00 % | 20523865 | 100.00 % | 20523865 | 100.00 % |
| General Reads | 26953326 | 65.66 % | 13572258 | 66.13 % | 13381068 | 65.20 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16 | 0.00 % | 9 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 14094388 | 34.34 % | 6951598 | 33.87 % | 7142790 | 34.80 % |
| Bisulfite_reads C2T | 13914141 | 33.90 % | 7004512 | 34.13 % | 6909629 | 33.67 % |
| Bisulfite_reads G2A | 13039201 | 31.77 % | 6567755 | 32.00 % | 6471446 | 31.53 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 10155451 |
| Average Unique | 49.48 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 995755223 | 31.50 % | 432800698 | 27.39 % | 562954525 | 35.62 % |
| Base Counts Overall C | 559924184 | 17.72 % | 191598032 | 12.12 % | 368326152 | 23.31 % |
| Base Counts Overall G | 571876372 | 18.09 % | 374269004 | 23.68 % | 197607368 | 12.50 % |
| Base Counts Overall T | 991874365 | 31.38 % | 561057916 | 35.50 % | 430816449 | 27.26 % |
| Base Counts Overall N | 41245066 | 1.30 % | 20611955 | 1.30 % | 20633111 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 12707493 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 20523865 |
| 76 | 20523865 |
Insert Size Plot
| Insert Size Histogram |
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