/EXTERNAL BLUEPRINT/K011770_K011771_K011772_K011773_K011774_K011775_K011776_K011777_K011778_K011798_K011799_11_lane_gembs

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SAMPLE K011770_K011771_K011772_K011773_K011774_K011775_K011776_K011777_K011778_K011798_K011799_11_lane_gembs

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	303718278	100.00 %	151859139	100.00 %	151859139	100.00 %
General Reads	223346101	73.54 %	112411640	74.02 %	110934461	73.05 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	133	0.00 %	58	0.00 %	75	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	80372044	26.46 %	39447441	25.98 %	40924603	26.95 %
Bisulfite_reads C2T	115316481	37.97 %	58025695	38.21 %	57290786	37.73 %
Bisulfite_reads G2A	108029753	35.57 %	54386003	35.81 %	53643750	35.32 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	85401361
Average Unique	56.24 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	7509945094	32.11 %	3174476521	27.15 %	4335468573	37.08 %
Base Counts Overall C	4019385224	17.19 %	1215545633	10.40 %	2803839591	23.98 %
Base Counts Overall G	4130786797	17.66 %	2864856510	24.50 %	1265930287	10.83 %
Base Counts Overall T	7421018450	31.73 %	4285763388	36.65 %	3135255062	26.81 %
Base Counts Overall N	305171841	1.30 %	152511651	1.30 %	152660190	1.31 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	NA
Over Conversion Rate	NA

Correct Pairs

Concept	Total Reads
Correct Pairs	105798763

Mapping Quality

Mapping Quality Histogram

Insert Size Plot

Insert Size Histogram

Mapping Lanes Reports

LANE REPORTS
EXTERNAL-K011772_1894714_2
EXTERNAL-K011775_1894717_2
EXTERNAL-K011776_1894718_2
EXTERNAL-K011770_1894712_2
EXTERNAL-K011771_1894713_2
EXTERNAL-K011774_1894716_2
EXTERNAL-K011777_1894719_2
EXTERNAL-K011799_1894741_2
EXTERNAL-K011773_1894715_2
EXTERNAL-K011778_1894720_2
EXTERNAL-K011798_1894740_2