/EXTERNAL BLUEPRINT/K011801_K011811_K011812_K011813_K011814_K011815_K011816_K011817_K011818_K011851_K011852_11_lane_gembs/EXTERNAL-K011818_1894760_2
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SAMPLE K011801_K011811_K011812_K011813_K011814_K011815_K011816_K011817_K011818_K011851_K011852_11_lane_gembs LANE EXTERNAL-K011818_1894760_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 14726638 | 100.00 % | 7363319 | 100.00 % | 7363319 | 100.00 % |
| General Reads | 6407939 | 43.51 % | 3217338 | 43.69 % | 3190601 | 43.33 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8318697 | 56.49 % | 4145980 | 56.31 % | 4172717 | 56.67 % |
| Bisulfite_reads C2T | 3302093 | 22.42 % | 1658065 | 22.52 % | 1644028 | 22.33 % |
| Bisulfite_reads G2A | 3105848 | 21.09 % | 1559274 | 21.18 % | 1546574 | 21.00 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 2427661 |
| Average Unique | 32.97 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 328881076 | 29.00 % | 152666964 | 26.93 % | 176214112 | 31.08 % |
| Base Counts Overall C | 228839294 | 20.18 % | 100237033 | 17.68 % | 128602261 | 22.68 % |
| Base Counts Overall G | 233951137 | 20.63 % | 130295761 | 22.98 % | 103655376 | 18.28 % |
| Base Counts Overall T | 327376474 | 28.87 % | 176355038 | 31.10 % | 151021436 | 26.64 % |
| Base Counts Overall N | 14903145 | 1.31 % | 7420767 | 1.31 % | 7482378 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 2987764 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 7363319 |
| 76 | 7363319 |
Insert Size Plot
| Insert Size Histogram |
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