/EXTERNAL BLUEPRINT/K011929_K011931_K011932_K011933_K011934_5_lane_gembs/EXTERNAL-K011931_1894873_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 9662870 | 100.00 % | 4831435 | 100.00 % | 4831435 | 100.00 % |
| General Reads | 5859377 | 60.64 % | 2952599 | 61.11 % | 2906778 | 60.16 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3803493 | 39.36 % | 1878836 | 38.89 % | 1924657 | 39.84 % |
| Bisulfite_reads C2T | 3023112 | 31.29 % | 1522982 | 31.52 % | 1500130 | 31.05 % |
| Bisulfite_reads G2A | 2836265 | 29.35 % | 1429617 | 29.59 % | 1406648 | 29.11 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2215373 |
| Average Unique | 45.85 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 233385326 | 31.37 % | 99938365 | 26.86 % | 133446961 | 35.87 % |
| Base Counts Overall C | 132583099 | 17.82 % | 45007436 | 12.10 % | 87575663 | 23.54 % |
| Base Counts Overall G | 135274003 | 18.18 % | 88532812 | 23.80 % | 46741191 | 12.56 % |
| Base Counts Overall T | 232922721 | 31.31 % | 133659394 | 35.93 % | 99263327 | 26.68 % |
| Base Counts Overall N | 9875841 | 1.33 % | 4882488 | 1.31 % | 4993353 | 1.34 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 2727368 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 4831435 |
| 76 | 4831435 |
| Insert Size Histogram |
|---|
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