/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011856_1894798_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 99384408 | 100.00 % | 49692204 | 100.00 % | 49692204 | 100.00 % |
| General Reads | 81126648 | 81.63 % | 41076766 | 82.66 % | 40049882 | 80.60 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 15 | 0.00 % | 8 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 18257745 | 18.37 % | 8615430 | 17.34 % | 9642315 | 19.40 % |
| Bisulfite_reads C2T | 42591985 | 42.86 % | 21512593 | 43.29 % | 21079392 | 42.42 % |
| Bisulfite_reads G2A | 38534678 | 38.77 % | 19564181 | 39.37 % | 18970497 | 38.18 % |
| Concept | Value |
|---|---|
| Unique Fragments | 30114036 |
| Average Unique | 60.60 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2526011455 | 33.01 % | 1058133077 | 27.65 % | 1467878378 | 38.36 % |
| Base Counts Overall C | 1235253495 | 16.14 % | 335316978 | 8.76 % | 899936517 | 23.52 % |
| Base Counts Overall G | 1275322642 | 16.67 % | 923552107 | 24.14 % | 351770535 | 9.19 % |
| Base Counts Overall T | 2515969914 | 32.88 % | 1459208373 | 38.14 % | 1056761541 | 27.62 % |
| Base Counts Overall N | 100041910 | 1.31 % | 50089173 | 1.31 % | 49952737 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 37807032 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 49692204 |
| 76 | 49692204 |
| Insert Size Histogram |
|---|
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