/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011865_1894807_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16373278 | 100.00 % | 8186639 | 100.00 % | 8186639 | 100.00 % |
| General Reads | 10551785 | 64.45 % | 5348408 | 65.33 % | 5203377 | 63.56 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8 | 0.00 % | 4 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5821485 | 35.55 % | 2838227 | 34.67 % | 2983258 | 36.44 % |
| Bisulfite_reads C2T | 5441346 | 33.23 % | 2757258 | 33.68 % | 2684088 | 32.79 % |
| Bisulfite_reads G2A | 5110447 | 31.21 % | 2591154 | 31.65 % | 2519293 | 30.77 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4057860 |
| Average Unique | 49.57 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 371055314 | 29.43 % | 168818385 | 26.78 % | 202236929 | 32.08 % |
| Base Counts Overall C | 246614474 | 19.56 % | 103545691 | 16.43 % | 143068783 | 22.70 % |
| Base Counts Overall G | 254880934 | 20.22 % | 146919230 | 23.31 % | 107961704 | 17.13 % |
| Base Counts Overall T | 371706935 | 29.48 % | 202834582 | 32.18 % | 168872353 | 26.79 % |
| Base Counts Overall N | 16484749 | 1.31 % | 8253315 | 1.31 % | 8231434 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5023866 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8186639 |
| 76 | 8186639 |
| Insert Size Histogram |
|---|
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