/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011866_1894808_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17167798 | 100.00 % | 8583899 | 100.00 % | 8583899 | 100.00 % |
| General Reads | 11397705 | 66.39 % | 5784582 | 67.39 % | 5613123 | 65.39 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5770091 | 33.61 % | 2799316 | 32.61 % | 2970775 | 34.61 % |
| Bisulfite_reads C2T | 5887755 | 34.30 % | 2987086 | 34.80 % | 2900669 | 33.79 % |
| Bisulfite_reads G2A | 5509952 | 32.09 % | 2797497 | 32.59 % | 2712455 | 31.60 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4380076 |
| Average Unique | 51.03 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 407820660 | 30.85 % | 178925541 | 27.07 % | 228895119 | 34.63 % |
| Base Counts Overall C | 240156219 | 18.17 % | 88397815 | 13.37 % | 151758404 | 22.96 % |
| Base Counts Overall G | 250338109 | 18.94 % | 156834902 | 23.73 % | 93503207 | 14.15 % |
| Base Counts Overall T | 406322660 | 30.74 % | 228149430 | 34.52 % | 178173230 | 26.96 % |
| Base Counts Overall N | 17282798 | 1.31 % | 8652535 | 1.31 % | 8630263 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5429244 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8583899 |
| 76 | 8583899 |
| Insert Size Histogram |
|---|
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