/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011867_1894809_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 18190564 | 100.00 % | 9095282 | 100.00 % | 9095282 | 100.00 % |
| General Reads | 9366734 | 51.49 % | 4748971 | 52.21 % | 4617763 | 50.77 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3 | 0.00 % | 1 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8823827 | 48.51 % | 4346310 | 47.79 % | 4477517 | 49.23 % |
| Bisulfite_reads C2T | 4822153 | 26.51 % | 2444018 | 26.87 % | 2378135 | 26.15 % |
| Bisulfite_reads G2A | 4544584 | 24.98 % | 2304954 | 25.34 % | 2239630 | 24.62 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3599012 |
| Average Unique | 39.57 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 386229788 | 27.57 % | 188857480 | 26.97 % | 197372308 | 28.18 % |
| Base Counts Overall C | 299584010 | 21.39 % | 143207840 | 20.45 % | 156376170 | 22.33 % |
| Base Counts Overall G | 307194806 | 21.93 % | 159368250 | 22.76 % | 147826556 | 21.11 % |
| Base Counts Overall T | 389352580 | 27.80 % | 199733625 | 28.52 % | 189618955 | 27.08 % |
| Base Counts Overall N | 18312244 | 1.31 % | 9169519 | 1.31 % | 9142725 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4462417 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9095282 |
| 76 | 9095282 |
| Insert Size Histogram |
|---|
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