/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011868_1894810_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 14993280 | 100.00 % | 7496640 | 100.00 % | 7496640 | 100.00 % |
| General Reads | 9910061 | 66.10 % | 5033763 | 67.15 % | 4876298 | 65.05 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 2 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5083215 | 33.90 % | 2462875 | 32.85 % | 2620340 | 34.95 % |
| Bisulfite_reads C2T | 5118898 | 34.14 % | 2599340 | 34.67 % | 2519558 | 33.61 % |
| Bisulfite_reads G2A | 4791167 | 31.96 % | 2434425 | 32.47 % | 2356742 | 31.44 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3793913 |
| Average Unique | 50.61 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 345128595 | 29.89 % | 154645109 | 26.79 % | 190483486 | 33.00 % |
| Base Counts Overall C | 220208147 | 19.07 % | 85907872 | 14.88 % | 134300275 | 23.27 % |
| Base Counts Overall G | 227071286 | 19.67 % | 137441560 | 23.81 % | 89629726 | 15.53 % |
| Base Counts Overall T | 346983883 | 30.06 % | 191691325 | 33.21 % | 155292558 | 26.90 % |
| Base Counts Overall N | 15090649 | 1.31 % | 7555414 | 1.31 % | 7535235 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4712607 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 7496640 |
| 76 | 7496640 |
| Insert Size Histogram |
|---|
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