/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011869_1894811_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16102016 | 100.00 % | 8051008 | 100.00 % | 8051008 | 100.00 % |
| General Reads | 11067302 | 68.73 % | 5612738 | 69.71 % | 5454564 | 67.75 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 11 | 0.00 % | 4 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5034703 | 31.27 % | 2438266 | 30.29 % | 2596437 | 32.25 % |
| Bisulfite_reads C2T | 5713610 | 35.48 % | 2896475 | 35.98 % | 2817135 | 34.99 % |
| Bisulfite_reads G2A | 5353703 | 33.25 % | 2716267 | 33.74 % | 2637436 | 32.76 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4264569 |
| Average Unique | 52.97 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 373555499 | 30.13 % | 168021349 | 27.10 % | 205534150 | 33.15 % |
| Base Counts Overall C | 233461412 | 18.83 % | 91709080 | 14.79 % | 141752332 | 22.87 % |
| Base Counts Overall G | 241660482 | 19.49 % | 145672061 | 23.50 % | 95988421 | 15.48 % |
| Base Counts Overall T | 374969775 | 30.24 % | 206410836 | 33.30 % | 168558939 | 27.19 % |
| Base Counts Overall N | 16208064 | 1.31 % | 8114290 | 1.31 % | 8093774 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5273172 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8051008 |
| 76 | 8051008 |
| Insert Size Histogram |
|---|
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