/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011870_1894812_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 13220278 | 100.00 % | 6610139 | 100.00 % | 6610139 | 100.00 % |
| General Reads | 7950816 | 60.14 % | 4028237 | 60.94 % | 3922579 | 59.34 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5269460 | 39.86 % | 2581901 | 39.06 % | 2687559 | 40.66 % |
| Bisulfite_reads C2T | 4094510 | 30.97 % | 2073654 | 31.37 % | 2020856 | 30.57 % |
| Bisulfite_reads G2A | 3856308 | 29.17 % | 1954584 | 29.57 % | 1901724 | 28.77 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3066373 |
| Average Unique | 46.39 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 286438893 | 28.14 % | 137184360 | 26.95 % | 149254533 | 29.32 % |
| Base Counts Overall C | 211826086 | 20.81 % | 98095146 | 19.27 % | 113730940 | 22.34 % |
| Base Counts Overall G | 217721686 | 21.39 % | 116204497 | 22.83 % | 101517189 | 19.95 % |
| Base Counts Overall T | 288664511 | 28.36 % | 150831593 | 29.63 % | 137832918 | 27.08 % |
| Base Counts Overall N | 13310230 | 1.31 % | 6665107 | 1.31 % | 6645123 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3792318 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 6610139 |
| 76 | 6610139 |
| Insert Size Histogram |
|---|
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