/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011871_1894813_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 15023206 | 100.00 % | 7511603 | 100.00 % | 7511603 | 100.00 % |
| General Reads | 9833100 | 65.45 % | 4988639 | 66.41 % | 4844461 | 64.49 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 1 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5190105 | 34.55 % | 2522963 | 33.59 % | 2667142 | 35.51 % |
| Bisulfite_reads C2T | 5072468 | 33.76 % | 2572617 | 34.25 % | 2499851 | 33.28 % |
| Bisulfite_reads G2A | 4760633 | 31.69 % | 2416023 | 32.16 % | 2344610 | 31.21 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3760850 |
| Average Unique | 50.07 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 335615324 | 29.01 % | 157545051 | 27.24 % | 178070273 | 30.79 % |
| Base Counts Overall C | 231728762 | 20.03 % | 102221201 | 17.67 % | 129507561 | 22.39 % |
| Base Counts Overall G | 238760280 | 20.64 % | 133196154 | 23.03 % | 105564126 | 18.25 % |
| Base Counts Overall T | 335559314 | 29.01 % | 177858834 | 30.75 % | 157700480 | 27.27 % |
| Base Counts Overall N | 15123182 | 1.31 % | 7572191 | 1.31 % | 7550991 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4658921 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 7511603 |
| 76 | 7511603 |
| Insert Size Histogram |
|---|
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