/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011899_1894841_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 29759714 | 100.00 % | 14879857 | 100.00 % | 14879857 | 100.00 % |
| General Reads | 20698838 | 69.55 % | 10485044 | 70.46 % | 10213794 | 68.64 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 197 | 0.00 % | 97 | 0.00 % | 100 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9060679 | 30.45 % | 4394716 | 29.53 % | 4665963 | 31.36 % |
| Bisulfite_reads C2T | 10660778 | 35.82 % | 5398743 | 36.28 % | 5262035 | 35.36 % |
| Bisulfite_reads G2A | 10038257 | 33.73 % | 5086398 | 34.18 % | 4951859 | 33.28 % |
| Concept | Value |
|---|---|
| Unique Fragments | 8200220 |
| Average Unique | 55.11 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 623149480 | 27.19 % | 318849419 | 27.83 % | 304300061 | 26.56 % |
| Base Counts Overall C | 501817002 | 21.90 % | 256651605 | 22.40 % | 245165397 | 21.40 % |
| Base Counts Overall G | 509019103 | 22.21 % | 248973296 | 21.73 % | 260045807 | 22.70 % |
| Base Counts Overall T | 627369905 | 27.38 % | 306210385 | 26.73 % | 321159520 | 28.03 % |
| Base Counts Overall N | 30142488 | 1.32 % | 15064284 | 1.31 % | 15078204 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.02771843758377683 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 9925934 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14879857 |
| 76 | 14879857 |
| Insert Size Histogram |
|---|
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