/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011900_1894842_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 31444498 | 100.00 % | 15722249 | 100.00 % | 15722249 | 100.00 % |
| General Reads | 15327779 | 48.75 % | 7776372 | 49.46 % | 7551407 | 48.03 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 22 | 0.00 % | 12 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 16116697 | 51.25 % | 7945865 | 50.54 % | 8170832 | 51.97 % |
| Bisulfite_reads C2T | 7916693 | 25.18 % | 4014572 | 25.53 % | 3902121 | 24.82 % |
| Bisulfite_reads G2A | 7411108 | 23.57 % | 3761812 | 23.93 % | 3649296 | 23.21 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5868678 |
| Average Unique | 37.33 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 646753976 | 26.71 % | 318978698 | 26.35 % | 327775278 | 27.08 % |
| Base Counts Overall C | 541188096 | 22.35 % | 262880644 | 21.71 % | 278307452 | 22.99 % |
| Base Counts Overall G | 553228625 | 22.85 % | 284215882 | 23.48 % | 269012743 | 22.22 % |
| Base Counts Overall T | 648185131 | 26.77 % | 328612587 | 27.14 % | 319572544 | 26.40 % |
| Base Counts Overall N | 31870518 | 1.32 % | 15925362 | 1.32 % | 15945156 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7254977 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 15722249 |
| 76 | 15722249 |
| Insert Size Histogram |
|---|
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