/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011901_1894843_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 13477656 | 100.00 % | 6738828 | 100.00 % | 6738828 | 100.00 % |
| General Reads | 6377061 | 47.32 % | 3238520 | 48.06 % | 3138541 | 46.57 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 4 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7100589 | 52.68 % | 3500304 | 51.94 % | 3600285 | 53.43 % |
| Bisulfite_reads C2T | 3278928 | 24.33 % | 1664249 | 24.70 % | 1614679 | 23.96 % |
| Bisulfite_reads G2A | 3098139 | 22.99 % | 1574275 | 23.36 % | 1523864 | 22.61 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2488363 |
| Average Unique | 36.93 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 268155646 | 25.84 % | 133504824 | 25.73 % | 134650822 | 25.95 % |
| Base Counts Overall C | 241211629 | 23.24 % | 121866071 | 23.49 % | 119345558 | 23.00 % |
| Base Counts Overall G | 245705256 | 23.68 % | 121892768 | 23.49 % | 123812488 | 23.86 % |
| Base Counts Overall T | 269060235 | 25.93 % | 134804964 | 25.98 % | 134255271 | 25.87 % |
| Base Counts Overall N | 13646746 | 1.31 % | 6821129 | 1.31 % | 6825617 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3050245 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 6738828 |
| 76 | 6738828 |
| Insert Size Histogram |
|---|
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