/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011902_1894844_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 27293492 | 100.00 % | 13646746 | 100.00 % | 13646746 | 100.00 % |
| General Reads | 16753821 | 61.38 % | 8482888 | 62.16 % | 8270933 | 60.61 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16 | 0.00 % | 8 | 0.00 % | 8 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10539655 | 38.62 % | 5163850 | 37.84 % | 5375805 | 39.39 % |
| Bisulfite_reads C2T | 8640210 | 31.66 % | 4372528 | 32.04 % | 4267682 | 31.27 % |
| Bisulfite_reads G2A | 8113627 | 29.73 % | 4110368 | 30.12 % | 4003259 | 29.33 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6526573 |
| Average Unique | 47.83 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 554867063 | 26.40 % | 282683428 | 26.90 % | 272183635 | 25.90 % |
| Base Counts Overall C | 475613394 | 22.63 % | 244618664 | 23.28 % | 230994730 | 21.98 % |
| Base Counts Overall G | 481854805 | 22.93 % | 234079419 | 22.28 % | 247775386 | 23.58 % |
| Base Counts Overall T | 561626662 | 26.72 % | 275603656 | 26.23 % | 286023006 | 27.22 % |
| Base Counts Overall N | 27636960 | 1.32 % | 13814275 | 1.31 % | 13822685 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 8071532 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13646746 |
| 76 | 13646746 |
| Insert Size Histogram |
|---|
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