/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011903_1894845_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 22666126 | 100.00 % | 11333063 | 100.00 % | 11333063 | 100.00 % |
| General Reads | 13362745 | 58.95 % | 6784000 | 59.86 % | 6578745 | 58.05 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 3 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9303375 | 41.05 % | 4549060 | 40.14 % | 4754315 | 41.95 % |
| Bisulfite_reads C2T | 6870563 | 30.31 % | 3486459 | 30.76 % | 3384104 | 29.86 % |
| Bisulfite_reads G2A | 6492188 | 28.64 % | 3297544 | 29.10 % | 3194644 | 28.19 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5255831 |
| Average Unique | 46.38 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 466073822 | 26.70 % | 235334742 | 26.97 % | 230739080 | 26.44 % |
| Base Counts Overall C | 389873063 | 22.34 % | 197241632 | 22.60 % | 192631431 | 22.07 % |
| Base Counts Overall G | 394324087 | 22.59 % | 195469566 | 22.40 % | 198854521 | 22.79 % |
| Base Counts Overall T | 472067271 | 27.05 % | 233125372 | 26.71 % | 238941899 | 27.38 % |
| Base Counts Overall N | 22953459 | 1.32 % | 11474539 | 1.31 % | 11478920 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6417599 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11333063 |
| 76 | 11333063 |
| Insert Size Histogram |
|---|
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