/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011904_1894846_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 28402416 | 100.00 % | 14201208 | 100.00 % | 14201208 | 100.00 % |
| General Reads | 24979661 | 87.95 % | 12647890 | 89.06 % | 12331771 | 86.84 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 2 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3422751 | 12.05 % | 1553316 | 10.94 % | 1869435 | 13.16 % |
| Bisulfite_reads C2T | 12848151 | 45.24 % | 6502864 | 45.79 % | 6345287 | 44.68 % |
| Bisulfite_reads G2A | 12131514 | 42.71 % | 6145028 | 43.27 % | 5986486 | 42.15 % |
| Concept | Value |
|---|---|
| Unique Fragments | 10075612 |
| Average Unique | 70.95 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 619236127 | 28.31 % | 319655381 | 29.23 % | 299580746 | 27.40 % |
| Base Counts Overall C | 453820902 | 20.75 % | 231659054 | 21.19 % | 222161848 | 20.32 % |
| Base Counts Overall G | 459553708 | 21.01 % | 225588536 | 20.63 % | 233965172 | 21.40 % |
| Base Counts Overall T | 625611454 | 28.61 % | 302218326 | 27.64 % | 323393128 | 29.57 % |
| Base Counts Overall N | 28763841 | 1.32 % | 14371719 | 1.31 % | 14392122 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 12083003 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14201208 |
| 76 | 14201208 |
| Insert Size Histogram |
|---|
 |