/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011905_1894847_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 24072896 | 100.00 % | 12036448 | 100.00 % | 12036448 | 100.00 % |
| General Reads | 12200049 | 50.68 % | 6200372 | 51.51 % | 5999677 | 49.85 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 22 | 0.00 % | 8 | 0.00 % | 14 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 11872825 | 49.32 % | 5836068 | 48.49 % | 6036757 | 50.15 % |
| Bisulfite_reads C2T | 6289583 | 26.13 % | 3194979 | 26.54 % | 3094604 | 25.71 % |
| Bisulfite_reads G2A | 5910488 | 24.55 % | 3005401 | 24.97 % | 2905087 | 24.14 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4760969 |
| Average Unique | 39.55 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 486971192 | 26.27 % | 243344721 | 26.26 % | 243626471 | 26.29 % |
| Base Counts Overall C | 422374117 | 22.79 % | 210781566 | 22.74 % | 211592551 | 22.83 % |
| Base Counts Overall G | 428286096 | 23.11 % | 214514017 | 23.15 % | 213772079 | 23.07 % |
| Base Counts Overall T | 491592173 | 26.52 % | 245981097 | 26.54 % | 245611076 | 26.50 % |
| Base Counts Overall N | 24389414 | 1.32 % | 12185095 | 1.31 % | 12204319 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5842737 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12036448 |
| 76 | 12036448 |
| Insert Size Histogram |
|---|
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