/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011906_1894848_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 22643038 | 100.00 % | 11321519 | 100.00 % | 11321519 | 100.00 % |
| General Reads | 12075630 | 53.33 % | 6129177 | 54.14 % | 5946453 | 52.52 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 58 | 0.00 % | 28 | 0.00 % | 30 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10567350 | 46.67 % | 5192314 | 45.86 % | 5375036 | 47.48 % |
| Bisulfite_reads C2T | 6205662 | 27.41 % | 3148076 | 27.81 % | 3057586 | 27.01 % |
| Bisulfite_reads G2A | 5870026 | 25.92 % | 2981129 | 26.33 % | 2888897 | 25.52 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4778875 |
| Average Unique | 42.21 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 451774093 | 25.91 % | 228807710 | 26.25 % | 222966383 | 25.58 % |
| Base Counts Overall C | 403035429 | 23.12 % | 206093184 | 23.64 % | 196942245 | 22.59 % |
| Base Counts Overall G | 409144215 | 23.47 % | 200676330 | 23.02 % | 208467885 | 23.91 % |
| Base Counts Overall T | 456634097 | 26.19 % | 224722103 | 25.78 % | 231911994 | 26.60 % |
| Base Counts Overall N | 22926092 | 1.31 % | 11457636 | 1.31 % | 11468456 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5792433 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11321519 |
| 76 | 11321519 |
| Insert Size Histogram |
|---|
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