/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011907_1894849_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 20776120 | 100.00 % | 10388060 | 100.00 % | 10388060 | 100.00 % |
| General Reads | 12275441 | 59.08 % | 6240004 | 60.07 % | 6035437 | 58.10 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 24 | 0.00 % | 13 | 0.00 % | 11 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8500655 | 40.92 % | 4148043 | 39.93 % | 4352612 | 41.90 % |
| Bisulfite_reads C2T | 6318300 | 30.41 % | 3209843 | 30.90 % | 3108457 | 29.92 % |
| Bisulfite_reads G2A | 5957165 | 28.67 % | 3030174 | 29.17 % | 2926991 | 28.18 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4697955 |
| Average Unique | 45.22 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 446136620 | 27.89 % | 214446852 | 26.81 % | 231689768 | 28.97 % |
| Base Counts Overall C | 342621384 | 21.42 % | 160749666 | 20.10 % | 181871718 | 22.74 % |
| Base Counts Overall G | 352135747 | 22.01 % | 187113531 | 23.39 % | 165022216 | 20.63 % |
| Base Counts Overall T | 437811088 | 27.37 % | 227047868 | 28.39 % | 210763220 | 26.35 % |
| Base Counts Overall N | 21056401 | 1.32 % | 10522703 | 1.32 % | 10533698 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5794863 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 10388060 |
| 76 | 10388060 |
| Insert Size Histogram |
|---|
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