/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011908_1894850_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 24422444 | 100.00 % | 12211222 | 100.00 % | 12211222 | 100.00 % |
| General Reads | 8422440 | 34.49 % | 4267056 | 34.94 % | 4155384 | 34.03 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 15 | 0.00 % | 9 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15999989 | 65.51 % | 7944157 | 65.06 % | 8055832 | 65.97 % |
| Bisulfite_reads C2T | 4329098 | 17.73 % | 2192342 | 17.95 % | 2136756 | 17.50 % |
| Bisulfite_reads G2A | 4093357 | 16.76 % | 2074723 | 16.99 % | 2018634 | 16.53 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3232934 |
| Average Unique | 26.48 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 522826100 | 27.80 % | 241584358 | 25.69 % | 281241742 | 29.91 % |
| Base Counts Overall C | 404110843 | 21.49 % | 181337138 | 19.29 % | 222773705 | 23.69 % |
| Base Counts Overall G | 408811117 | 21.74 % | 226371087 | 24.08 % | 182440030 | 19.40 % |
| Base Counts Overall T | 520064304 | 27.66 % | 278618294 | 29.63 % | 241446010 | 25.68 % |
| Base Counts Overall N | 24715824 | 1.31 % | 12353217 | 1.31 % | 12362607 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3982334 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12211222 |
| 76 | 12211222 |
| Insert Size Histogram |
|---|
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