/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011909_1894851_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 24245236 | 100.00 % | 12122618 | 100.00 % | 12122618 | 100.00 % |
| General Reads | 16132391 | 66.54 % | 8196367 | 67.61 % | 7936024 | 65.46 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 21 | 0.00 % | 11 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8112824 | 33.46 % | 3926240 | 32.39 % | 4186584 | 34.54 % |
| Bisulfite_reads C2T | 8300545 | 34.24 % | 4215820 | 34.78 % | 4084725 | 33.70 % |
| Bisulfite_reads G2A | 7831867 | 32.30 % | 3980558 | 32.84 % | 3851309 | 31.77 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6368279 |
| Average Unique | 52.53 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 501696782 | 26.87 % | 255070404 | 27.33 % | 246626378 | 26.42 % |
| Base Counts Overall C | 415743439 | 22.27 % | 212845544 | 22.80 % | 202897895 | 21.74 % |
| Base Counts Overall G | 416937138 | 22.33 % | 204519262 | 21.91 % | 212417876 | 22.76 % |
| Base Counts Overall T | 507933703 | 27.21 % | 248728082 | 26.65 % | 259205621 | 27.77 % |
| Base Counts Overall N | 24572110 | 1.32 % | 12278294 | 1.32 % | 12293816 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7767609 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12122618 |
| 76 | 12122618 |
| Insert Size Histogram |
|---|
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