/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011912_1894854_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 19844068 | 100.00 % | 9922034 | 100.00 % | 9922034 | 100.00 % |
| General Reads | 11816274 | 59.55 % | 5993630 | 60.41 % | 5822644 | 58.68 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 28 | 0.00 % | 15 | 0.00 % | 13 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8027766 | 40.45 % | 3928389 | 39.59 % | 4099377 | 41.32 % |
| Bisulfite_reads C2T | 6090553 | 30.69 % | 3088061 | 31.12 % | 3002492 | 30.26 % |
| Bisulfite_reads G2A | 5725749 | 28.85 % | 2905584 | 29.28 % | 2820165 | 28.42 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4547956 |
| Average Unique | 45.84 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 413771555 | 27.08 % | 204776032 | 26.80 % | 208995523 | 27.36 % |
| Base Counts Overall C | 336214558 | 22.00 % | 161704329 | 21.17 % | 174510229 | 22.84 % |
| Base Counts Overall G | 343187738 | 22.46 % | 177942552 | 23.29 % | 165245186 | 21.63 % |
| Base Counts Overall T | 414713642 | 27.14 % | 209528228 | 27.43 % | 205185414 | 26.86 % |
| Base Counts Overall N | 20105743 | 1.32 % | 10045477 | 1.31 % | 10060266 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5644751 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9922034 |
| 76 | 9922034 |
| Insert Size Histogram |
|---|
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