/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011913_1894855_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 22592352 | 100.00 % | 11296176 | 100.00 % | 11296176 | 100.00 % |
| General Reads | 12513942 | 55.39 % | 6349600 | 56.21 % | 6164342 | 54.57 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 15 | 0.00 % | 9 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10078395 | 44.61 % | 4946567 | 43.79 % | 5131828 | 45.43 % |
| Bisulfite_reads C2T | 6444725 | 28.53 % | 3268460 | 28.93 % | 3176265 | 28.12 % |
| Bisulfite_reads G2A | 6069232 | 26.86 % | 3081149 | 27.28 % | 2988083 | 26.45 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4871270 |
| Average Unique | 43.12 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 470153368 | 27.03 % | 230542063 | 26.51 % | 239611305 | 27.55 % |
| Base Counts Overall C | 383127307 | 22.02 % | 182529180 | 20.99 % | 200598127 | 23.06 % |
| Base Counts Overall G | 392353524 | 22.55 % | 205336112 | 23.61 % | 187017412 | 21.50 % |
| Base Counts Overall T | 471087467 | 27.08 % | 239960807 | 27.59 % | 231126660 | 26.57 % |
| Base Counts Overall N | 22889438 | 1.32 % | 11437390 | 1.31 % | 11452048 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5980429 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11296176 |
| 76 | 11296176 |
| Insert Size Histogram |
|---|
 |