/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011914_1894856_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 27632478 | 100.00 % | 13816239 | 100.00 % | 13816239 | 100.00 % |
| General Reads | 12106181 | 43.81 % | 6141134 | 44.45 % | 5965047 | 43.17 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 34 | 0.00 % | 11 | 0.00 % | 23 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15526263 | 56.19 % | 7675094 | 55.55 % | 7851169 | 56.83 % |
| Bisulfite_reads C2T | 6240628 | 22.58 % | 3164531 | 22.90 % | 3076097 | 22.26 % |
| Bisulfite_reads G2A | 5865587 | 21.23 % | 2976614 | 21.54 % | 2888973 | 20.91 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4665433 |
| Average Unique | 33.77 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 558572537 | 26.25 % | 272477881 | 25.61 % | 286094656 | 26.89 % |
| Base Counts Overall C | 485632652 | 22.82 % | 235588369 | 22.14 % | 250044283 | 23.50 % |
| Base Counts Overall G | 497668127 | 23.39 % | 256279907 | 24.09 % | 241388220 | 22.69 % |
| Base Counts Overall T | 557820455 | 26.22 % | 285513304 | 26.84 % | 272307151 | 25.60 % |
| Base Counts Overall N | 28007035 | 1.32 % | 13990942 | 1.32 % | 14016093 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5759447 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13816239 |
| 76 | 13816239 |
| Insert Size Histogram |
|---|
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