/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011915_1894857_2

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SAMPLE K011856_K011920_28libs_28_lane_gembs LANE EXTERNAL-K011915_1894857_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 27025282 100.00 % 13512641 100.00 % 13512641 100.00 %
General Reads 17959292 66.45 % 9090116 67.27 % 8869176 65.64 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 27 0.00 % 13 0.00 % 14 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 9065963 33.55 % 4422512 32.73 % 4643451 34.36 %
Bisulfite_reads C2T 9240531 34.19 % 4675244 34.60 % 4565287 33.79 %
Bisulfite_reads G2A 8718788 32.26 % 4414885 32.67 % 4303903 31.85 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 7155088
Average Unique 52.95 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 573249486 27.55 % 284763654 27.37 % 288485832 27.73 %
Base Counts Overall C 448158777 21.54 % 220246353 21.17 % 227912424 21.90 %
Base Counts Overall G 456940928 21.96 % 232305135 22.33 % 224635793 21.59 %
Base Counts Overall T 575231090 27.64 % 289484810 27.82 % 285746280 27.46 %
Base Counts Overall N 27366433 1.32 % 13673405 1.31 % 13693028 1.32 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate NA
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 8622438



Mapping Quality

Mapping Quality Histogram
EXTERNAL-K011915_1894857_2.mapq.png



Read Length

Read Length Reads
76 13512641
76 13512641



Insert Size Plot

Insert Size Histogram
EXTERNAL-K011915_1894857_2.isize.png