/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011916_1894858_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 24861500 | 100.00 % | 12430750 | 100.00 % | 12430750 | 100.00 % |
| General Reads | 20983472 | 84.40 % | 10619637 | 85.43 % | 10363835 | 83.37 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 15 | 0.00 % | 9 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3878013 | 15.60 % | 1811104 | 14.57 % | 2066909 | 16.63 % |
| Bisulfite_reads C2T | 10784107 | 43.38 % | 5455758 | 43.89 % | 5328349 | 42.86 % |
| Bisulfite_reads G2A | 10199380 | 41.02 % | 5163888 | 41.54 % | 5035492 | 40.51 % |
| Concept | Value |
|---|---|
| Unique Fragments | 8383497 |
| Average Unique | 67.44 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 534647662 | 27.93 % | 268849226 | 28.09 % | 265798436 | 27.77 % |
| Base Counts Overall C | 404645435 | 21.14 % | 206863587 | 21.61 % | 197781848 | 20.66 % |
| Base Counts Overall G | 410179632 | 21.43 % | 200614329 | 20.96 % | 209565303 | 21.89 % |
| Base Counts Overall T | 539667183 | 28.19 % | 268251329 | 28.03 % | 271415854 | 28.36 % |
| Base Counts Overall N | 25195588 | 1.32 % | 12589279 | 1.32 % | 12606309 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 10109985 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12430750 |
| 76 | 12430750 |
| Insert Size Histogram |
|---|
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