/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011919_1894861_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 36643882 | 100.00 % | 18321941 | 100.00 % | 18321941 | 100.00 % |
| General Reads | 29201303 | 79.69 % | 14867492 | 81.15 % | 14333811 | 78.23 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 7 | 0.00 % | 4 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7442572 | 20.31 % | 3454445 | 18.85 % | 3988127 | 21.77 % |
| Bisulfite_reads C2T | 15074769 | 41.14 % | 7672236 | 41.87 % | 7402533 | 40.40 % |
| Bisulfite_reads G2A | 14126541 | 38.55 % | 7195260 | 39.27 % | 6931281 | 37.83 % |
| Concept | Value |
|---|---|
| Unique Fragments | 10979524 |
| Average Unique | 59.93 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 923775960 | 32.74 % | 388882000 | 27.56 % | 534893960 | 37.91 % |
| Base Counts Overall C | 468232854 | 16.59 % | 140687549 | 9.97 % | 327545305 | 23.22 % |
| Base Counts Overall G | 485670175 | 17.21 % | 338300580 | 23.98 % | 147369595 | 10.45 % |
| Base Counts Overall T | 907022217 | 32.15 % | 524461241 | 37.18 % | 382560976 | 27.12 % |
| Base Counts Overall N | 36877708 | 1.31 % | 18458087 | 1.31 % | 18419621 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 13737274 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 18321941 |
| 76 | 18321941 |
| Insert Size Histogram |
|---|
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