/EXTERNAL BLUEPRINT/K011856_K011920_28libs_28_lane_gembs/EXTERNAL-K011920_1894862_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 41596340 | 100.00 % | 20798170 | 100.00 % | 20798170 | 100.00 % |
| General Reads | 32062651 | 77.08 % | 16267455 | 78.22 % | 15795196 | 75.95 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 2 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9533687 | 22.92 % | 4530713 | 21.78 % | 5002974 | 24.05 % |
| Bisulfite_reads C2T | 16557107 | 39.80 % | 8397016 | 40.37 % | 8160091 | 39.23 % |
| Bisulfite_reads G2A | 15505546 | 37.28 % | 7870441 | 37.84 % | 7635105 | 36.71 % |
| Concept | Value |
|---|---|
| Unique Fragments | 12279296 |
| Average Unique | 59.04 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1031771416 | 32.21 % | 439913224 | 27.47 % | 591858192 | 36.96 % |
| Base Counts Overall C | 540979004 | 16.89 % | 168861253 | 10.54 % | 372117751 | 23.24 % |
| Base Counts Overall G | 558804957 | 17.45 % | 380978990 | 23.79 % | 177825967 | 11.10 % |
| Base Counts Overall T | 1029494529 | 32.14 % | 590745318 | 36.89 % | 438749211 | 27.40 % |
| Base Counts Overall N | 41868274 | 1.31 % | 20960305 | 1.31 % | 20907969 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 15199097 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 20798170 |
| 76 | 20798170 |
| Insert Size Histogram |
|---|
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