/EXTERNAL BLUEPRINT/methylation/K011856_K011920_28libs_28_lane_gembs
BACK
SAMPLE K011856_K011920_28libs_28_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
23627740 |
2543734 |
10.77 % |
| NonRefCpG |
569963 |
7973 |
1.40 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
3283682 |
8.41 % |
96571 |
1.57 % |
212962 |
25.37 % |
1498 |
4.71 % |
| Intermediate (0.3-0.7) |
11769225 |
30.14 % |
1004570 |
16.37 % |
290608 |
34.62 % |
6511 |
20.45 % |
| Methylated (0.7-1) |
23992500 |
61.45 % |
5034039 |
82.05 % |
335758 |
40.00 % |
23824 |
74.84 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.780 |
|
0.880 |
|
0.600 |
|
0.850 |
|