/EXTERNAL BLUEPRINT/K011858_K011880_K011881_K011882_K011883_K011884_K011885_K011886_K011887_K011923_K011924_11_lane_gembs/EXTERNAL-K011858_1894800_2
BACK
SAMPLE K011858_K011880_K011881_K011882_K011883_K011884_K011885_K011886_K011887_K011923_K011924_11_lane_gembs LANE EXTERNAL-K011858_1894800_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 110738704 | 100.00 % | 55369352 | 100.00 % | 55369352 | 100.00 % |
| General Reads | 105419580 | 95.20 % | 53355720 | 96.36 % | 52063860 | 94.03 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 2 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5319120 | 4.80 % | 2013630 | 3.64 % | 3305490 | 5.97 % |
| Bisulfite_reads C2T | 54503971 | 49.22 % | 27576732 | 49.81 % | 26927239 | 48.63 % |
| Bisulfite_reads G2A | 50915613 | 45.98 % | 25778990 | 46.56 % | 25136623 | 45.40 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 39949939 |
| Average Unique | 72.15 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 3079327476 | 36.11 % | 1178512009 | 27.64 % | 1900815467 | 44.58 % |
| Base Counts Overall C | 1123493768 | 13.18 % | 120361090 | 2.82 % | 1003132678 | 23.53 % |
| Base Counts Overall G | 1178212282 | 13.82 % | 1027188479 | 24.09 % | 151023803 | 3.54 % |
| Base Counts Overall T | 3033681772 | 35.58 % | 1881545127 | 44.13 % | 1152136645 | 27.02 % |
| Base Counts Overall N | 112164910 | 1.32 % | 55833399 | 1.31 % | 56331511 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 49538090 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 55369352 |
| 76 | 55369352 |
Insert Size Plot
| Insert Size Histogram |
 |