/EXTERNAL BLUEPRINT/K011858_K011880_K011881_K011882_K011883_K011884_K011885_K011886_K011887_K011923_K011924_11_lane_gembs/EXTERNAL-K011881_1894823_2
BACK
SAMPLE K011858_K011880_K011881_K011882_K011883_K011884_K011885_K011886_K011887_K011923_K011924_11_lane_gembs LANE EXTERNAL-K011881_1894823_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 20323390 | 100.00 % | 10161695 | 100.00 % | 10161695 | 100.00 % |
| General Reads | 16910542 | 83.21 % | 8574084 | 84.38 % | 8336458 | 82.04 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3 | 0.00 % | 2 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3412845 | 16.79 % | 1587609 | 15.62 % | 1825236 | 17.96 % |
| Bisulfite_reads C2T | 8723237 | 42.92 % | 4421181 | 43.51 % | 4302056 | 42.34 % |
| Bisulfite_reads G2A | 8187308 | 40.29 % | 4152905 | 40.87 % | 4034403 | 39.70 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 6530208 |
| Average Unique | 64.26 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 523980382 | 33.48 % | 210683630 | 26.93 % | 313296752 | 40.04 % |
| Base Counts Overall C | 240272604 | 15.35 % | 56402058 | 7.21 % | 183870546 | 23.50 % |
| Base Counts Overall G | 253125866 | 16.18 % | 189568171 | 24.23 % | 63557695 | 8.12 % |
| Base Counts Overall T | 526940746 | 33.67 % | 315550520 | 40.33 % | 211390226 | 27.02 % |
| Base Counts Overall N | 20581432 | 1.32 % | 10246136 | 1.31 % | 10335296 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 8068458 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 10161695 |
| 76 | 10161695 |
Insert Size Plot
| Insert Size Histogram |
 |