/EXTERNAL BLUEPRINT/K011858_K011880_K011881_K011882_K011883_K011884_K011885_K011886_K011887_K011923_K011924_11_lane_gembs/EXTERNAL-K011883_1894825_2
BACK
SAMPLE K011858_K011880_K011881_K011882_K011883_K011884_K011885_K011886_K011887_K011923_K011924_11_lane_gembs LANE EXTERNAL-K011883_1894825_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 16820158 | 100.00 % | 8410079 | 100.00 % | 8410079 | 100.00 % |
| General Reads | 13785646 | 81.96 % | 7006083 | 83.31 % | 6779563 | 80.61 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8 | 0.00 % | 1 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3034504 | 18.04 % | 1403995 | 16.69 % | 1630509 | 19.39 % |
| Bisulfite_reads C2T | 7108503 | 42.26 % | 3611417 | 42.94 % | 3497086 | 41.58 % |
| Bisulfite_reads G2A | 6677151 | 39.70 % | 3394667 | 40.36 % | 3282484 | 39.03 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5232328 |
| Average Unique | 62.21 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 436496739 | 33.70 % | 177010404 | 27.33 % | 259486335 | 40.07 % |
| Base Counts Overall C | 199515343 | 15.40 % | 47714092 | 7.37 % | 151801251 | 23.44 % |
| Base Counts Overall G | 211115936 | 16.30 % | 157476738 | 24.32 % | 53639198 | 8.28 % |
| Base Counts Overall T | 430993644 | 33.28 % | 256898268 | 39.67 % | 174095376 | 26.88 % |
| Base Counts Overall N | 17030504 | 1.31 % | 8476581 | 1.31 % | 8553923 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6537484 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 8410079 |
| 76 | 8410079 |
Insert Size Plot
| Insert Size Histogram |
 |