/EXTERNAL BLUEPRINT/K011938_K011939_2_lane_gembs/EXTERNAL-K011938_1894880_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 19895658 | 100.00 % | 9947829 | 100.00 % | 9947829 | 100.00 % |
| General Reads | 12195170 | 61.30 % | 6123909 | 61.56 % | 6071261 | 61.03 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3 | 0.00 % | 1 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7700485 | 38.70 % | 3823919 | 38.44 % | 3876566 | 38.97 % |
| Bisulfite_reads C2T | 6302463 | 31.68 % | 3164401 | 31.81 % | 3138062 | 31.55 % |
| Bisulfite_reads G2A | 5892710 | 29.62 % | 2959509 | 29.75 % | 2933201 | 29.49 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4727457 |
| Average Unique | 47.52 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 482782133 | 31.51 % | 192346205 | 25.11 % | 290435928 | 37.92 % |
| Base Counts Overall C | 270868137 | 17.68 % | 77502562 | 10.12 % | 193365575 | 25.24 % |
| Base Counts Overall G | 278168810 | 18.16 % | 197196904 | 25.74 % | 80971906 | 10.57 % |
| Base Counts Overall T | 479919054 | 31.33 % | 288813860 | 37.71 % | 191105194 | 24.95 % |
| Base Counts Overall N | 20227532 | 1.32 % | 10123302 | 1.32 % | 10104230 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5812555 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9947829 |
| 76 | 9947829 |
| Insert Size Histogram |
|---|
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